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KJC3_005252-T1, KJC3_005252-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005252-T1
Unique NameKJC3_005252-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2094849..2097096+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005252-T1 ID=KJC3_005252-T1|Name=KJC3_005252-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2248bp|location=Sequence derived from alignment at ch4:2094849..2097096+ (Aspergillus niger KJC3)
TCTTGTTCTCTTCTTCGTCCCTGTCCACAATTGGATCCCAACCAAGGCCC
AGTCGATGTGGGTGGAGAGCATGGGACCATTGACACGGTGCCCAGTAACT
TTATTCCCATTAACTTCCCCCCTCCCAGAAAAAGCCCCTTACCCGCACTG
TTCCATCAGCAAATGGACTGACTGGCAATTGGGCCAAGGCCGTGAATAGT
AGGTAATGGTCTCGTCCTTATGCCCAGCGGACGCAAGCTCCCTGCCGAGT
CCTGCGGTTGCTGCCCAAAACCCTATGCAGCACCGGATCCTTCGACTCCT
CATTTCCTTTCCTGACATGCGTGATTGAGGGCAAGATCAGCATACAGAAG
TTGGCCATGTCCCGCTGGTGGAGTCTCGCTGCGATTTACTGCCGGGTCCA
TCCATGGCTATGTACCCCAGTATGCCTGGTGCAGCTCCACTGATTGCACG
GAAGACTGGCAGGGCGTCTAGCTCCGGGAATTATTGTCTGGCTACTGCGC
CGGCGGACTTCCTTATTGCTTTTCATCGTCCCTTGTTCTCCCGGACGTCT
CTGGCTCAATCGATCCCCCTCAACCCTGTCGGCGAGGCACGGTGGAGACC
TGACTCGATTGGCCCTGAAAGCAAGATGAATTTGTTGTTTTCCGTATAGT
ACGAGGTGTCTTCCGGCACGCGCTTCCTCCCTGACATGAGCGGAGCCCGG
CCTTGAGCAATCCAGTCCTCTTGCCACTTATAGTGGAGTTCTTCATATCC
CTTCCGGCTTGCCATATCTCACGCGGCCTTTGAAATTAAAAGCTTATCTG
GTGCCGTGGACCGTCCACCCTCTTATTTTATTTTTTTTTGCCCACATTAT
CTGCTACTTTTACTATAATAAACGCCCCGTTCTACTCGCTGTCAGGCACC
ATTCTGAAAGGTCTGGACTGAACAGGCTGAGGTTACCTCGCCATCGTGTA
TACCCGTTCATTCTTCTATATAAATCATCAGCCTCATGTCCACGGTCCTT
TCACCCTCATTGATCGCAATGTCTTCAGGCCTCAGTTACTTCTCAAGAGC
ATCCGGGAGCAGCGGCTCCTGCACACATTCCATCAGCAGTGATGATTCGT
GGTCCCGCCACAGGTTAGCCCCAACGCAATATTCTCGTTAAACTCCTCTT
GGTGGTGTCGTTGGGGGAAGCTCACCTTATACAGTGGCATCATGCCCCAA
CAACCGTCCGTATACGGGACTTCGGGCGAGGCGCCCGTGATCTACCATCC
AAGGTACCTTGTCACTATCTTGTATCGACGTTGCTTCCTTTCTTTGCAGA
ATCTATCATGCTGAGACTCTCATGTTACTCATTCTTAGCGCTAGAAGGTT
CTCCCCTCCGCAAATTGAGCGTGGACCTATAGATACTCAGGTTCCTGTCA
AGCCCAACAAGCCAGTTTCATCGGACTTCGCCATGCCATACAGCGGACTT
CCAGTGACCTCACATGCATTGGGAACAATTCCCGTGTCTGCAGGAGGCGC
CTTGCCACGCCCCACAGCTCTCTACCCAGAGTGGGACCACCCTGCTCGCC
TCCCAGCGGAGTCGCTCAGGCGTGATTACGACCTAGTCAGACCTTACGAG
ACGTCGGAGTACCTAATTGAAAGAAACAGCCGACGCGCAACGGAGAAGCC
CAAAGGCGCTACTCGGTATCACTCGCAAAGACGGCCGTCTAATCGCGACG
AGTTTGACGGACCCCACCAGTTGCTAGACCCTCCGTCACCGCGGGTCATA
GCAGCCCAAGGGAGGGATTTGCCTCATCTACCTACTAATCTTGATGTCTC
AGAGCAAGATCAAATTCTGACGTCAGTAAATGACCGACTGTCACAGTGCG
CATTTGACTTTGTTGCAAAGTATCAATTTCCGATTCCACTGGAACCGGAC
AAGAGGCCGGTGAGAGTTCCTTCTGACCGCGAGTGGACCGAGTGGGTATA
TCTCCTAAAGAGACTGGCGACCAAGCGTCGCATCCCAGCCCGGGTGTTGT
ATAATGGCCAGATCAAGCAGTTAGTGACCGTGCTGGAAAATTCCCTGGAG
ATGAGACATGCAGCCAAGCATCAGTCTCGGCCCATCAAAGATGATCGGAA
TGTCCTTCAGCTTATCTCAGCTGGCACACAGGTGGCCAAGATCCTTAAGG
ATGCCAATGCCATGGAATTCCTTGACCGCCTCTATCTTGATACAGAAAAA
CGCATCCATGATCGACGCAGCCGTCGAGTGAAATTTGCCAGCCCATGA
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Coding sequence (CDS) from alignment at ch4:2094849..2097096+

>KJC3_005252-T1 ID=KJC3_005252-T1|Name=KJC3_005252-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch4:2094849..2097096+ (Aspergillus niger KJC3)
ATGCCCCAACAACCGTCCGTATACGGGACTTCGGGCGAGGCGCCCGTGAT
CTACCATCCAAGCGCTAGAAGGTTCTCCCCTCCGCAAATTGAGCGTGGAC
CTATAGATACTCAGGTTCCTGTCAAGCCCAACAAGCCAGTTTCATCGGAC
TTCGCCATGCCATACAGCGGACTTCCAGTGACCTCACATGCATTGGGAAC
AATTCCCGTGTCTGCAGGAGGCGCCTTGCCACGCCCCACAGCTCTCTACC
CAGAGTGGGACCACCCTGCTCGCCTCCCAGCGGAGTCGCTCAGGCGTGAT
TACGACCTAGTCAGACCTTACGAGACGTCGGAGTACCTAATTGAAAGAAA
CAGCCGACGCGCAACGGAGAAGCCCAAAGGCGCTACTCGGTATCACTCGC
AAAGACGGCCGTCTAATCGCGACGAGTTTGACGGACCCCACCAGTTGCTA
GACCCTCCGTCACCGCGGGTCATAGCAGCCCAAGGGAGGGATTTGCCTCA
TCTACCTACTAATCTTGATGTCTCAGAGCAAGATCAAATTCTGACGTCAG
TAAATGACCGACTGTCACAGTGCGCATTTGACTTTGTTGCAAAGTATCAA
TTTCCGATTCCACTGGAACCGGACAAGAGGCCGGTGAGAGTTCCTTCTGA
CCGCGAGTGGACCGAGTGGGTATATCTCCTAAAGAGACTGGCGACCAAGC
GTCGCATCCCAGCCCGGGTGTTGTATAATGGCCAGATCAAGCAGTTAGTG
ACCGTGCTGGAAAATTCCCTGGAGATGAGACATGCAGCCAAGCATCAGTC
TCGGCCCATCAAAGATGATCGGAATGTCCTTCAGCTTATCTCAGCTGGCA
CACAGGTGGCCAAGATCCTTAAGGATGCCAATGCCATGGAATTCCTTGAC
CGCCTCTATCTTGATACAGAAAAACGCATCCATGATCGACGCAGCCGTCG
AGTGAAATTTGCCAGCCCATGAATGCCCCAACAACCGTCCGTATACGGGA
CTTCGGGCGAGGCGCCCGTGATCTACCATCCAAGCGCTAGAAGGTTCTCC
CCTCCGCAAATTGAGCGTGGACCTATAGATACTCAGGTTCCTGTCAAGCC
CAACAAGCCAGTTTCATCGGACTTCGCCATGCCATACAGCGGACTTCCAG
TGACCTCACATGCATTGGGAACAATTCCCGTGTCTGCAGGAGGCGCCTTG
CCACGCCCCACAGCTCTCTACCCAGAGTGGGACCACCCTGCTCGCCTCCC
AGCGGAGTCGCTCAGGCGTGATTACGACCTAGTCAGACCTTACGAGACGT
CGGAGTACCTAATTGAAAGAAACAGCCGACGCGCAACGGAGAAGCCCAAA
GGCGCTACTCGGTATCACTCGCAAAGACGGCCGTCTAATCGCGACGAGTT
TGACGGACCCCACCAGTTGCTAGACCCTCCGTCACCGCGGGTCATAGCAG
CCCAAGGGAGGGATTTGCCTCATCTACCTACTAATCTTGATGTCTCAGAG
CAAGATCAAATTCTGACGTCAGTAAATGACCGACTGTCACAGTGCGCATT
TGACTTTGTTGCAAAGTATCAATTTCCGATTCCACTGGAACCGGACAAGA
GGCCGGTGAGAGTTCCTTCTGACCGCGAGTGGACCGAGTGGGTATATCTC
CTAAAGAGACTGGCGACCAAGCGTCGCATCCCAGCCCGGGTGTTGTATAA
TGGCCAGATCAAGCAGTTAGTGACCGTGCTGGAAAATTCCCTGGAGATGA
GACATGCAGCCAAGCATCAGTCTCGGCCCATCAAAGATGATCGGAATGTC
CTTCAGCTTATCTCAGCTGGCACACAGGTGGCCAAGATCCTTAAGGATGC
CAATGCCATGGAATTCCTTGACCGCCTCTATCTTGATACAGAAAAACGCA
TCCATGATCGACGCAGCCGTCGAGTGAAATTTGCCAGCCCATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005252KJC3_005252Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005252-T1KJC3_005252-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005252-T1.utr5p1KJC3_005252-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005252-T1.utr5p2KJC3_005252-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005252-T1.utr5p3KJC3_005252-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005252-T1.exon1KJC3_005252-T1.exon1Aspergillus niger KJC3exon
KJC3_005252-T1.exon2KJC3_005252-T1.exon2Aspergillus niger KJC3exon
KJC3_005252-T1.exon3KJC3_005252-T1.exon3Aspergillus niger KJC3exon
KJC3_005252-T1.exon4KJC3_005252-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005252-T1.cdsKJC3_005252-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2094849..2097096 +
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