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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2094849..2097096+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005252-T1 ID=KJC3_005252-T1|Name=KJC3_005252-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2248bp|location=Sequence derived from alignment at ch4:2094849..2097096+ (Aspergillus niger KJC3)
TCTTGTTCTCTTCTTCGTCCCTGTCCACAATTGGATCCCAACCAAGGCCC
AGTCGATGTGGGTGGAGAGCATGGGACCATTGACACGGTGCCCAGTAACT
TTATTCCCATTAACTTCCCCCCTCCCAGAAAAAGCCCCTTACCCGCACTG
TTCCATCAGCAAATGGACTGACTGGCAATTGGGCCAAGGCCGTGAATAGT
AGGTAATGGTCTCGTCCTTATGCCCAGCGGACGCAAGCTCCCTGCCGAGT
CCTGCGGTTGCTGCCCAAAACCCTATGCAGCACCGGATCCTTCGACTCCT
CATTTCCTTTCCTGACATGCGTGATTGAGGGCAAGATCAGCATACAGAAG
TTGGCCATGTCCCGCTGGTGGAGTCTCGCTGCGATTTACTGCCGGGTCCA
TCCATGGCTATGTACCCCAGTATGCCTGGTGCAGCTCCACTGATTGCACG
GAAGACTGGCAGGGCGTCTAGCTCCGGGAATTATTGTCTGGCTACTGCGC
CGGCGGACTTCCTTATTGCTTTTCATCGTCCCTTGTTCTCCCGGACGTCT
CTGGCTCAATCGATCCCCCTCAACCCTGTCGGCGAGGCACGGTGGAGACC
TGACTCGATTGGCCCTGAAAGCAAGATGAATTTGTTGTTTTCCGTATAGT
ACGAGGTGTCTTCCGGCACGCGCTTCCTCCCTGACATGAGCGGAGCCCGG
CCTTGAGCAATCCAGTCCTCTTGCCACTTATAGTGGAGTTCTTCATATCC
CTTCCGGCTTGCCATATCTCACGCGGCCTTTGAAATTAAAAGCTTATCTG
GTGCCGTGGACCGTCCACCCTCTTATTTTATTTTTTTTTGCCCACATTAT
CTGCTACTTTTACTATAATAAACGCCCCGTTCTACTCGCTGTCAGGCACC
ATTCTGAAAGGTCTGGACTGAACAGGCTGAGGTTACCTCGCCATCGTGTA
TACCCGTTCATTCTTCTATATAAATCATCAGCCTCATGTCCACGGTCCTT
TCACCCTCATTGATCGCAATGTCTTCAGGCCTCAGTTACTTCTCAAGAGC
ATCCGGGAGCAGCGGCTCCTGCACACATTCCATCAGCAGTGATGATTCGT
GGTCCCGCCACAGGTTAGCCCCAACGCAATATTCTCGTTAAACTCCTCTT
GGTGGTGTCGTTGGGGGAAGCTCACCTTATACAGTGGCATCATGCCCCAA
CAACCGTCCGTATACGGGACTTCGGGCGAGGCGCCCGTGATCTACCATCC
AAGGTACCTTGTCACTATCTTGTATCGACGTTGCTTCCTTTCTTTGCAGA
ATCTATCATGCTGAGACTCTCATGTTACTCATTCTTAGCGCTAGAAGGTT
CTCCCCTCCGCAAATTGAGCGTGGACCTATAGATACTCAGGTTCCTGTCA
AGCCCAACAAGCCAGTTTCATCGGACTTCGCCATGCCATACAGCGGACTT
CCAGTGACCTCACATGCATTGGGAACAATTCCCGTGTCTGCAGGAGGCGC
CTTGCCACGCCCCACAGCTCTCTACCCAGAGTGGGACCACCCTGCTCGCC
TCCCAGCGGAGTCGCTCAGGCGTGATTACGACCTAGTCAGACCTTACGAG
ACGTCGGAGTACCTAATTGAAAGAAACAGCCGACGCGCAACGGAGAAGCC
CAAAGGCGCTACTCGGTATCACTCGCAAAGACGGCCGTCTAATCGCGACG
AGTTTGACGGACCCCACCAGTTGCTAGACCCTCCGTCACCGCGGGTCATA
GCAGCCCAAGGGAGGGATTTGCCTCATCTACCTACTAATCTTGATGTCTC
AGAGCAAGATCAAATTCTGACGTCAGTAAATGACCGACTGTCACAGTGCG
CATTTGACTTTGTTGCAAAGTATCAATTTCCGATTCCACTGGAACCGGAC
AAGAGGCCGGTGAGAGTTCCTTCTGACCGCGAGTGGACCGAGTGGGTATA
TCTCCTAAAGAGACTGGCGACCAAGCGTCGCATCCCAGCCCGGGTGTTGT
ATAATGGCCAGATCAAGCAGTTAGTGACCGTGCTGGAAAATTCCCTGGAG
ATGAGACATGCAGCCAAGCATCAGTCTCGGCCCATCAAAGATGATCGGAA
TGTCCTTCAGCTTATCTCAGCTGGCACACAGGTGGCCAAGATCCTTAAGG
ATGCCAATGCCATGGAATTCCTTGACCGCCTCTATCTTGATACAGAAAAA
CGCATCCATGATCGACGCAGCCGTCGAGTGAAATTTGCCAGCCCATGA back to topCoding sequence (CDS) from alignment at ch4:2094849..2097096+ >KJC3_005252-T1 ID=KJC3_005252-T1|Name=KJC3_005252-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch4:2094849..2097096+ (Aspergillus niger KJC3)
ATGCCCCAACAACCGTCCGTATACGGGACTTCGGGCGAGGCGCCCGTGAT
CTACCATCCAAGCGCTAGAAGGTTCTCCCCTCCGCAAATTGAGCGTGGAC
CTATAGATACTCAGGTTCCTGTCAAGCCCAACAAGCCAGTTTCATCGGAC
TTCGCCATGCCATACAGCGGACTTCCAGTGACCTCACATGCATTGGGAAC
AATTCCCGTGTCTGCAGGAGGCGCCTTGCCACGCCCCACAGCTCTCTACC
CAGAGTGGGACCACCCTGCTCGCCTCCCAGCGGAGTCGCTCAGGCGTGAT
TACGACCTAGTCAGACCTTACGAGACGTCGGAGTACCTAATTGAAAGAAA
CAGCCGACGCGCAACGGAGAAGCCCAAAGGCGCTACTCGGTATCACTCGC
AAAGACGGCCGTCTAATCGCGACGAGTTTGACGGACCCCACCAGTTGCTA
GACCCTCCGTCACCGCGGGTCATAGCAGCCCAAGGGAGGGATTTGCCTCA
TCTACCTACTAATCTTGATGTCTCAGAGCAAGATCAAATTCTGACGTCAG
TAAATGACCGACTGTCACAGTGCGCATTTGACTTTGTTGCAAAGTATCAA
TTTCCGATTCCACTGGAACCGGACAAGAGGCCGGTGAGAGTTCCTTCTGA
CCGCGAGTGGACCGAGTGGGTATATCTCCTAAAGAGACTGGCGACCAAGC
GTCGCATCCCAGCCCGGGTGTTGTATAATGGCCAGATCAAGCAGTTAGTG
ACCGTGCTGGAAAATTCCCTGGAGATGAGACATGCAGCCAAGCATCAGTC
TCGGCCCATCAAAGATGATCGGAATGTCCTTCAGCTTATCTCAGCTGGCA
CACAGGTGGCCAAGATCCTTAAGGATGCCAATGCCATGGAATTCCTTGAC
CGCCTCTATCTTGATACAGAAAAACGCATCCATGATCGACGCAGCCGTCG
AGTGAAATTTGCCAGCCCATGAATGCCCCAACAACCGTCCGTATACGGGA
CTTCGGGCGAGGCGCCCGTGATCTACCATCCAAGCGCTAGAAGGTTCTCC
CCTCCGCAAATTGAGCGTGGACCTATAGATACTCAGGTTCCTGTCAAGCC
CAACAAGCCAGTTTCATCGGACTTCGCCATGCCATACAGCGGACTTCCAG
TGACCTCACATGCATTGGGAACAATTCCCGTGTCTGCAGGAGGCGCCTTG
CCACGCCCCACAGCTCTCTACCCAGAGTGGGACCACCCTGCTCGCCTCCC
AGCGGAGTCGCTCAGGCGTGATTACGACCTAGTCAGACCTTACGAGACGT
CGGAGTACCTAATTGAAAGAAACAGCCGACGCGCAACGGAGAAGCCCAAA
GGCGCTACTCGGTATCACTCGCAAAGACGGCCGTCTAATCGCGACGAGTT
TGACGGACCCCACCAGTTGCTAGACCCTCCGTCACCGCGGGTCATAGCAG
CCCAAGGGAGGGATTTGCCTCATCTACCTACTAATCTTGATGTCTCAGAG
CAAGATCAAATTCTGACGTCAGTAAATGACCGACTGTCACAGTGCGCATT
TGACTTTGTTGCAAAGTATCAATTTCCGATTCCACTGGAACCGGACAAGA
GGCCGGTGAGAGTTCCTTCTGACCGCGAGTGGACCGAGTGGGTATATCTC
CTAAAGAGACTGGCGACCAAGCGTCGCATCCCAGCCCGGGTGTTGTATAA
TGGCCAGATCAAGCAGTTAGTGACCGTGCTGGAAAATTCCCTGGAGATGA
GACATGCAGCCAAGCATCAGTCTCGGCCCATCAAAGATGATCGGAATGTC
CTTCAGCTTATCTCAGCTGGCACACAGGTGGCCAAGATCCTTAAGGATGC
CAATGCCATGGAATTCCTTGACCGCCTCTATCTTGATACAGAAAAACGCA
TCCATGATCGACGCAGCCGTCGAGTGAAATTTGCCAGCCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2094849..2097096 + |
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