|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2407302..2408880+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008569-T1 ID=KJC3_008569-T1|Name=KJC3_008569-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1579bp|location=Sequence derived from alignment at ch6:2407302..2408880+ (Aspergillus niger KJC3) CGTTGCATAGGCCGTCTCTGATCAATACGGGCATGCGCTAAGTGGCCAGT
TTACTTGAAGTCAGTATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGG
TGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTCCCCTCACTCC
CCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTTC
AAAAGACGTGAGTCAGAGCTAACAGGCTTGAAATTACTGGAGACTAATGA
TCGTCTTTATAGTTCAAGAAGGTCTTTTCCTGTACATGCGCAATGTTTCC
CCCTATGACGGAGGCGTCTTCCACCAGGTATAGCCGACGACTATACATCC
GAGTGAACACTCCTAACAAAGCACAGGCACCGCTACTTCTTCCTCTATTT
TCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATTCTA
CTCGCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGGATT
CGGGGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAGCATATT
AGATGGGATGGAGTGTCTATCGCGGCATGGTAAAGGGCGGATATCTATAC
TCGGTGTTTCTTGGTGCTGACCTTGTCAGGTTTCTATTCAATCCCTTCAC
CATCGCAACCTGCTTGGGCCGATCGACTGGGGTATTTACTACAACCGGAA
TCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAATGCAATG
CTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTT
CATTCCGCTTGTTCTTCTATGCTACGACCAGCGAGTCCAGAAAGCCAAGG
TTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTTTTCCTT
ACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTT
TTATAGCTTCATCTCTGCGACATATGGTGTCCAGTTGCTCGTGCCTGACC
TGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATCTTCGAC
TCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCATTTGGCTGCGTA
CATGGGTGGCCTTACTGTGCGACTGCGCCGACAGCCTTTGTTTGTGCTGA
CGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGCATTTCC
GACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCC
TCGTAAGCACACTTCCGACTGTATCTATTGACATGTGCTAATAGTATTTA
GTGATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCTACGCCACTCT
CCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGTAACG
CCAACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATCAATA
TTACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAATGGGAATACGA
CAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAACTGTACTTTA
ATCTACATACCCACTATAGCATCATCCAG back to topCoding sequence (CDS) from alignment at ch6:2407302..2408880+ >KJC3_008569-T1 ID=KJC3_008569-T1|Name=KJC3_008569-T1|organism=Aspergillus niger KJC3|type=CDS|length=6360bp|location=Sequence derived from alignment at ch6:2407302..2408880+ (Aspergillus niger KJC3) ATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCT GCGACTTCTTCTCTCAGTATTGTTCCCCTCACTCCCCGACTTGTTGACGG GTAGAGTCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAA GGTCTTTTCCTGTACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTT CCACCAGGCACCGCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCAC AATCTCATCCTATTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTG AATGCGAATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGG GAGATTCTATTCGGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTA TCGCGGCATGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGC CGATCGACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAG CGCTGTCACTGGAAACAGTCTGAATGCAATGCTGTCTCTGGGGCTTGCAT CGTACCTGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTA TGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACC GTTCGCTCTACAACACTTCGCAGTTTTCCTTACATGCATTGCAGGACTGC TTGGCATATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCG ACATATGGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCT TTGGTGGTATTTCTTCATCGAAATCTTCGACTCTTTTCGCGAGTTCTTCC TAGGGGTGTTCTGGCTTCATTTGGCTGCGTACATGGGTGGCCTTACTGTG CGACTGCGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTT TGCCATATTCAAGCCATATCCCAGCATTTCCGACGCCTCACTATATTTCG CCCTGCTTCCACTCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTT TTCGCAATCTCCGCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTA TCATCTCTGGATATACGCCGGCTCCGGTAACGCCAACTTCTTCTACGCCA TCACTCTGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATC TTCGCCGCCCTCCGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGG CAAAGAAGTGCGACAAGTTTAAATGGGGGTAGATCATAGGAAAGCCGCCG TGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTCCCC TCACTCCCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGAC CAGCTTCAAAAGACTTCAAGAAGGTCTTTTCCTGTACATGCGCAATGTTT CCCCCTATGACGGAGGCGTCTTCCACCAGGCACCGCTACTTCTTCCTCTA TTTTCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATT CTACTCGCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGG ATTCGGGGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAGCAT ATTAGATGGGATGGAGTGTCTATCGCGGCATGGTTTCTATTCAATCCCTT CACCATCGCAACCTGCTTGGGCCGATCGACTGGGGTATTTACTACAACCG GAATCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAATGCA ATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCT CTTCATTCCGCTTGTTCTTCTATGCTACGACCAGCGAGTCCAGAAAGCCA AGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTTTTC CTTACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGA CTTTTATAGCTTCATCTCTGCGACATATGGTGTCCAGTTGCTCGTGCCTG ACCTGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATCTTC GACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCATTTGGCTGC GTACATGGGTGGCCTTACTGTGCGACTGCGCCGACAGCCTTTGTTTGTGC TGACGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGCATT TCCGACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTT CCCTCTGATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCTACGCCA CTCTCCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGT AACGCCAACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATC AATATTACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAATGGGAAT ACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAAATGGGG GTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACT TCTTCTCTCAGTATTGTTCCCCTCACTCCCCGACTTGTTGACGGGTAGAG TCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAAGGTCTT TTCCTGTACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCA GGCACCGCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCACAATCTC ATCCTATTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTGAATGCG AATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGGGAGATT CTATTCGGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTATCGCGG CATGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGCCGATCG ACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGT CACTGGAAACAGTCTGAATGCAATGCTGTCTCTGGGGCTTGCATCGTACC TGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTATGCTAC GACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGC TCTACAACACTTCGCAGTTTTCCTTACATGCATTGCAGGACTGCTTGGCA TATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCGACATAT GGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTG GTATTTCTTCATCGAAATCTTCGACTCTTTTCGCGAGTTCTTCCTAGGGG TGTTCTGGCTTCATTTGGCTGCGTACATGGGTGGCCTTACTGTGCGACTG CGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCAT ATTCAAGCCATATCCCAGCATTTCCGACGCCTCACTATATTTCGCCCTGC TTCCACTCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTTTTCGCA ATCTCCGCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTATCATCT CTGGATATACGCCGGCTCCGGTAACGCCAACTTCTTCTACGCCATCACTC TGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATCTTCGCC GCCCTCCGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGGCAAAGA AGTGCGACAAGTTTAAATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCG GTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTCCCCTCACTC CCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTT CAAAAGACTTCAAGAAGGTCTTTTCCTGTACATGCGCAATGTTTCCCCCT ATGACGGAGGCGTCTTCCACCAGGCACCGCTACTTCTTCCTCTATTTTCC CTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATTCTACTC GCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGGATTCGG GGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAGCATATTAGA TGGGATGGAGTGTCTATCGCGGCATGGTTTCTATTCAATCCCTTCACCAT CGCAACCTGCTTGGGCCGATCGACTGGGGTATTTACTACAACCGGAATCC TATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAATGCAATGCTG TCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTTCAT TCCGCTTGTTCTTCTATGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTT CCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTTTTCCTTACA TGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTTTTA TAGCTTCATCTCTGCGACATATGGTGTCCAGTTGCTCGTGCCTGACCTGA CCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATCTTCGACTCT TTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCATTTGGCTGCGTACAT GGGTGGCCTTACTGTGCGACTGCGCCGACAGCCTTTGTTTGTGCTGACGT CCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGCATTTCCGAC GCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCCTCT GATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCTACGCCACTCTCC TAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGTAACGCC AACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATCAATATT ACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAATGGGAATACGACA ACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAAATGGGGGTAGAT CATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCT CTCAGTATTGTTCCCCTCACTCCCCGACTTGTTGACGGGTAGAGTCGAGG TATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAAGGTCTTTTCCTG TACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCAGGCACC GCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCACAATCTCATCCTA TTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTGAATGCGAATGCT CTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGGGAGATTCTATTC GGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTATCGCGGCATGGT TTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGCCGATCGACTGGG GTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGTCACTGG AAACAGTCTGAATGCAATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGA TATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTATGCTACGACCAG CGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACA ACACTTCGCAGTTTTCCTTACATGCATTGCAGGACTGCTTGGCATATCTA CTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCGACATATGGTGTC CAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTGGTATTT CTTCATCGAAATCTTCGACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCT GGCTTCATTTGGCTGCGTACATGGGTGGCCTTACTGTGCGACTGCGCCGA CAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCATATTCAA GCCATATCCCAGCATTTCCGACGCCTCACTATATTTCGCCCTGCTTCCAC TCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTTTTCGCAATCTCC GCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTATCATCTCTGGAT ATACGCCGGCTCCGGTAACGCCAACTTCTTCTACGCCATCACTCTGGTAT GGAGTCTTGGCCTATCAATATTACTAGCGGACACCATCTTCGCCGCCCTC CGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCG ACAAGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0042765 | GPI-anchor transamidase complex |
Vocabulary: Biological Process
Term | Definition |
GO:0016255 | attachment of GPI anchor to protein |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008569-T1.utr5p1 | KJC3_008569-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008569-T1.utr3p1 | KJC3_008569-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-34) |
Note | BUSCO:EOG09262O0R |
DBxref | InterPro:IPR009600 |
DBxref | PFAM:PF06728 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2407302..2408880 + |
|