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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2407302..2408880+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008569-T1 ID=KJC3_008569-T1|Name=KJC3_008569-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1579bp|location=Sequence derived from alignment at ch6:2407302..2408880+ (Aspergillus niger KJC3)
CGTTGCATAGGCCGTCTCTGATCAATACGGGCATGCGCTAAGTGGCCAGT
TTACTTGAAGTCAGTATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGG
TGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTCCCCTCACTCC
CCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTTC
AAAAGACGTGAGTCAGAGCTAACAGGCTTGAAATTACTGGAGACTAATGA
TCGTCTTTATAGTTCAAGAAGGTCTTTTCCTGTACATGCGCAATGTTTCC
CCCTATGACGGAGGCGTCTTCCACCAGGTATAGCCGACGACTATACATCC
GAGTGAACACTCCTAACAAAGCACAGGCACCGCTACTTCTTCCTCTATTT
TCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATTCTA
CTCGCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGGATT
CGGGGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAGCATATT
AGATGGGATGGAGTGTCTATCGCGGCATGGTAAAGGGCGGATATCTATAC
TCGGTGTTTCTTGGTGCTGACCTTGTCAGGTTTCTATTCAATCCCTTCAC
CATCGCAACCTGCTTGGGCCGATCGACTGGGGTATTTACTACAACCGGAA
TCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAATGCAATG
CTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTT
CATTCCGCTTGTTCTTCTATGCTACGACCAGCGAGTCCAGAAAGCCAAGG
TTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTTTTCCTT
ACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTT
TTATAGCTTCATCTCTGCGACATATGGTGTCCAGTTGCTCGTGCCTGACC
TGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATCTTCGAC
TCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCATTTGGCTGCGTA
CATGGGTGGCCTTACTGTGCGACTGCGCCGACAGCCTTTGTTTGTGCTGA
CGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGCATTTCC
GACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCC
TCGTAAGCACACTTCCGACTGTATCTATTGACATGTGCTAATAGTATTTA
GTGATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCTACGCCACTCT
CCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGTAACG
CCAACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATCAATA
TTACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAATGGGAATACGA
CAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAACTGTACTTTA
ATCTACATACCCACTATAGCATCATCCAG back to topCoding sequence (CDS) from alignment at ch6:2407302..2408880+ >KJC3_008569-T1 ID=KJC3_008569-T1|Name=KJC3_008569-T1|organism=Aspergillus niger KJC3|type=CDS|length=6360bp|location=Sequence derived from alignment at ch6:2407302..2408880+ (Aspergillus niger KJC3)
ATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCT
GCGACTTCTTCTCTCAGTATTGTTCCCCTCACTCCCCGACTTGTTGACGG
GTAGAGTCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAA
GGTCTTTTCCTGTACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTT
CCACCAGGCACCGCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCAC
AATCTCATCCTATTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTG
AATGCGAATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGG
GAGATTCTATTCGGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTA
TCGCGGCATGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGC
CGATCGACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAG
CGCTGTCACTGGAAACAGTCTGAATGCAATGCTGTCTCTGGGGCTTGCAT
CGTACCTGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTA
TGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACC
GTTCGCTCTACAACACTTCGCAGTTTTCCTTACATGCATTGCAGGACTGC
TTGGCATATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCG
ACATATGGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCT
TTGGTGGTATTTCTTCATCGAAATCTTCGACTCTTTTCGCGAGTTCTTCC
TAGGGGTGTTCTGGCTTCATTTGGCTGCGTACATGGGTGGCCTTACTGTG
CGACTGCGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTT
TGCCATATTCAAGCCATATCCCAGCATTTCCGACGCCTCACTATATTTCG
CCCTGCTTCCACTCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTT
TTCGCAATCTCCGCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTA
TCATCTCTGGATATACGCCGGCTCCGGTAACGCCAACTTCTTCTACGCCA
TCACTCTGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATC
TTCGCCGCCCTCCGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGG
CAAAGAAGTGCGACAAGTTTAAATGGGGGTAGATCATAGGAAAGCCGCCG
TGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTCCCC
TCACTCCCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGAC
CAGCTTCAAAAGACTTCAAGAAGGTCTTTTCCTGTACATGCGCAATGTTT
CCCCCTATGACGGAGGCGTCTTCCACCAGGCACCGCTACTTCTTCCTCTA
TTTTCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATT
CTACTCGCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGG
ATTCGGGGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAGCAT
ATTAGATGGGATGGAGTGTCTATCGCGGCATGGTTTCTATTCAATCCCTT
CACCATCGCAACCTGCTTGGGCCGATCGACTGGGGTATTTACTACAACCG
GAATCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAATGCA
ATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCT
CTTCATTCCGCTTGTTCTTCTATGCTACGACCAGCGAGTCCAGAAAGCCA
AGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTTTTC
CTTACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGA
CTTTTATAGCTTCATCTCTGCGACATATGGTGTCCAGTTGCTCGTGCCTG
ACCTGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATCTTC
GACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCATTTGGCTGC
GTACATGGGTGGCCTTACTGTGCGACTGCGCCGACAGCCTTTGTTTGTGC
TGACGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGCATT
TCCGACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTT
CCCTCTGATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCTACGCCA
CTCTCCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGT
AACGCCAACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATC
AATATTACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAATGGGAAT
ACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAAATGGGG
GTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACT
TCTTCTCTCAGTATTGTTCCCCTCACTCCCCGACTTGTTGACGGGTAGAG
TCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAAGGTCTT
TTCCTGTACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCA
GGCACCGCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCACAATCTC
ATCCTATTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTGAATGCG
AATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGGGAGATT
CTATTCGGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTATCGCGG
CATGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGCCGATCG
ACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGT
CACTGGAAACAGTCTGAATGCAATGCTGTCTCTGGGGCTTGCATCGTACC
TGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTATGCTAC
GACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGC
TCTACAACACTTCGCAGTTTTCCTTACATGCATTGCAGGACTGCTTGGCA
TATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCGACATAT
GGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTG
GTATTTCTTCATCGAAATCTTCGACTCTTTTCGCGAGTTCTTCCTAGGGG
TGTTCTGGCTTCATTTGGCTGCGTACATGGGTGGCCTTACTGTGCGACTG
CGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCAT
ATTCAAGCCATATCCCAGCATTTCCGACGCCTCACTATATTTCGCCCTGC
TTCCACTCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTTTTCGCA
ATCTCCGCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTATCATCT
CTGGATATACGCCGGCTCCGGTAACGCCAACTTCTTCTACGCCATCACTC
TGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATCTTCGCC
GCCCTCCGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGGCAAAGA
AGTGCGACAAGTTTAAATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCG
GTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTCCCCTCACTC
CCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTT
CAAAAGACTTCAAGAAGGTCTTTTCCTGTACATGCGCAATGTTTCCCCCT
ATGACGGAGGCGTCTTCCACCAGGCACCGCTACTTCTTCCTCTATTTTCC
CTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATTCTACTC
GCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGGATTCGG
GGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAGCATATTAGA
TGGGATGGAGTGTCTATCGCGGCATGGTTTCTATTCAATCCCTTCACCAT
CGCAACCTGCTTGGGCCGATCGACTGGGGTATTTACTACAACCGGAATCC
TATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAATGCAATGCTG
TCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTTCAT
TCCGCTTGTTCTTCTATGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTT
CCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTTTTCCTTACA
TGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTTTTA
TAGCTTCATCTCTGCGACATATGGTGTCCAGTTGCTCGTGCCTGACCTGA
CCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATCTTCGACTCT
TTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCATTTGGCTGCGTACAT
GGGTGGCCTTACTGTGCGACTGCGCCGACAGCCTTTGTTTGTGCTGACGT
CCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGCATTTCCGAC
GCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCCTCT
GATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCTACGCCACTCTCC
TAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGTAACGCC
AACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATCAATATT
ACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAATGGGAATACGACA
ACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAAATGGGGGTAGAT
CATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCT
CTCAGTATTGTTCCCCTCACTCCCCGACTTGTTGACGGGTAGAGTCGAGG
TATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAAGGTCTTTTCCTG
TACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCAGGCACC
GCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCACAATCTCATCCTA
TTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTGAATGCGAATGCT
CTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGGGAGATTCTATTC
GGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTATCGCGGCATGGT
TTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGCCGATCGACTGGG
GTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGTCACTGG
AAACAGTCTGAATGCAATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGA
TATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTATGCTACGACCAG
CGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACA
ACACTTCGCAGTTTTCCTTACATGCATTGCAGGACTGCTTGGCATATCTA
CTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCGACATATGGTGTC
CAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTGGTATTT
CTTCATCGAAATCTTCGACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCT
GGCTTCATTTGGCTGCGTACATGGGTGGCCTTACTGTGCGACTGCGCCGA
CAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCATATTCAA
GCCATATCCCAGCATTTCCGACGCCTCACTATATTTCGCCCTGCTTCCAC
TCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTTTTCGCAATCTCC
GCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTATCATCTCTGGAT
ATACGCCGGCTCCGGTAACGCCAACTTCTTCTACGCCATCACTCTGGTAT
GGAGTCTTGGCCTATCAATATTACTAGCGGACACCATCTTCGCCGCCCTC
CGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCG
ACAAGTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0042765 | GPI-anchor transamidase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016255 | attachment of GPI anchor to protein |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008569-T1.utr5p1 | KJC3_008569-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008569-T1.utr3p1 | KJC3_008569-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-34) |
| Note | BUSCO:EOG09262O0R |
| DBxref | InterPro:IPR009600 |
| DBxref | PFAM:PF06728 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2407302..2408880 + |
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