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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2895384..2897152+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008743-T1 ID=KJC3_008743-T1|Name=KJC3_008743-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1769bp|location=Sequence derived from alignment at ch6:2895384..2897152+ (Aspergillus niger KJC3)
AGCAATCATCAATCAATACCAACCATATCATTTCAATTTCCCTTCCTTCT
CATCGTACAGCATACACTTCACTCCATCATGTCCACCTACACCATCGTCA
GCGGCGACTCATTATGGAAAATCTCCCAAGACCACGGCGTCACCCTCGAC
GCCCTCCGAGCAGCCAACCCGCAGATCACCAACCCAGATCTTATCTATCC
GGGGCAAGAGCTGAATATTCCGGGGCCTGATCAGCCTCCTCCGGAAAGTC
GCAGCATCCCGGGTGATGTCCCAGGCCAAGCTCCTCCTCCTTCTTCTGCT
CCTCCTGTTCACCTTGCCGTCTGTCCCCCAGGGCCGCCGGTTGTTCCAGG
CGCTGCTGGAGCACCGCCCGCCATTCCCCCGCGTCCTCCGATGGCCCGTC
CGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTGTTGGG
TACTTTACTAACTGGGTATGTTATAGCTTTAACTATTTGTATAAATCATT
TGACTAATAAACGTGACAGGGAGTCTACGGCCGCAATTACCAACCTCAAG
ATATTCCTGCGGAGTATATCACTCACATTCTCTGTACGTTCTATCCCAAT
TCTATCATAGCGCTAGTCTAACATCAATAGATTCCTTCGCCAACATCCGC
CCCACCGGCGAAGTGTACGTTTCACTCTTCCCCTCCAAACCAATCCACCA
AGCTAACATTTAGAAATGTAGCTTCCTCACCGACACCTACTCCGACCTCG
AAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTAC
GGATGCATCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAA
AACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGC
CAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCAC
CTCCTCGCGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCC
AGCCGATTCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGA
GGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTG
TTATTGACGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCG
GATAGGCGATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATG
ATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTC
CATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGAC
GATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAGCTTATATTTGGGT
TGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATGGGCCTGGGAGCGGG
TTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGGTGTGGGATTATAA
GGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGTTGATGG
CCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGTTAGTTATGATACG
CCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCCGGGAGGAGGTTGGG
AGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCATGTTTCGCATGAGA
GGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAGGTTGGGTGGGTTG
GACGGTACGGAGAATACGTTGTATTATCCGCTGAGTCGCTTTGAGAATTT
GAGGAGGGGGTGTGTTTGA back to topCoding sequence (CDS) from alignment at ch6:2895384..2897152+ >KJC3_008743-T1 ID=KJC3_008743-T1|Name=KJC3_008743-T1|organism=Aspergillus niger KJC3|type=CDS|length=6132bp|location=Sequence derived from alignment at ch6:2895384..2897152+ (Aspergillus niger KJC3)
ATGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCA
AGACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCA
CCAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCT
GATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGTGATGTCCCAGGCCA
AGCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCC
CAGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCCC
CCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAG
ACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGCC
GCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCTC
TATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACAC
CTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCG
GTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACAA
CACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCC
CAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCC
GCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACATC
GACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACCT
TTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTG
GCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAAT
ATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGAA
TCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATA
TGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCA
GATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAA
GCTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATG
GGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGG
GTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGA
TGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGG
TTAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCC
GGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCA
TGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTA
GGTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATCCGCTGAGT
CGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGAATGTCCACCTACACCAT
CGTCAGCGGCGACTCATTATGGAAAATCTCCCAAGACCACGGCGTCACCC
TCGACGCCCTCCGAGCAGCCAACCCGCAGATCACCAACCCAGATCTTATC
TATCCGGGGCAAGAGCTGAATATTCCGGGGCCTGATCAGCCTCCTCCGGA
AAGTCGCAGCATCCCGGGTGATGTCCCAGGCCAAGCTCCTCCTCCTTCTT
CTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCCCAGGGCCGCCGGTTGTT
CCAGGCGCTGCTGGAGCACCGCCCGCCATTCCCCCGCGTCCTCCGATGGC
CCGTCCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTG
TTGGGTACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAACCTCAA
GATATTCCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCCAACAT
CCGCCCCACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCTCGAAA
AGCACTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTACGGA
TGCATCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAAAAC
CCTCCTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGCCAG
CATCCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCACCTC
CTCGCGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCCAGC
CGATTCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGAGGC
GCGTGCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTGTTA
TTGACGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCGGAT
AGGCGATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATGATT
TCAGCGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTCCAT
TCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGACGAT
GTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAGCTTATATTTGGGTTGC
CGTTGTATGGAAGGGCTTTTGAGGGGACGGATGGGCCTGGGAGCGGGTTC
CAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGGTGTGGGATTATAAGGC
TTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGTTGATGGCCA
GTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGTTAGTTATGATACGCCG
GAGGTGGCCGGGATGAAGACGGAGTATATTGCCGGGAGGAGGTTGGGAGG
AGCTATGTGGTGGGAGTTGAGTGGGGATCATCATGTTTCGCATGAGAGGA
GCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAGGTTGGGTGGGTTGGAC
GGTACGGAGAATACGTTGTATTATCCGCTGAGTCGCTTTGAGAATTTGAG
GAGGGGGTGTGTTTGAATGTCCACCTACACCATCGTCAGCGGCGACTCAT
TATGGAAAATCTCCCAAGACCACGGCGTCACCCTCGACGCCCTCCGAGCA
GCCAACCCGCAGATCACCAACCCAGATCTTATCTATCCGGGGCAAGAGCT
GAATATTCCGGGGCCTGATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGG
GTGATGTCCCAGGCCAAGCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCAC
CTTGCCGTCTGTCCCCCAGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGC
ACCGCCCGCCATTCCCCCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGT
GGATCAATGCCGGGAGACCGGGGTATAAGACTGTTGGGTACTTTACTAAC
TGGGGAGTCTACGGCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTA
TATCACTCACATTCTCTATTCCTTCGCCAACATCCGCCCCACCGGCGAAG
TCTTCCTCACCGACACCTACTCCGACCTCGAAAAGCACTACCCAACCGAT
AGCTGGTCCGAGCCCGGTACCAACGCCTACGGATGCATCAAGCAACTCTA
CCTCCTAAAACAACAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCG
GCTGGACCTACAGTCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGT
CGCGAAACCTTCGCCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTT
CGACGGCATCGACATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGA
TGGACTTTGTGCACCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTAC
TCCGCCACCCATCTTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCC
GTGCGGGCCGGACAATATCCAGAAACTGCGGATAGGCGATATGGATCCGT
ATCTTGATTTCTGGAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGAT
AAGTGTTCCGGCCATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGAT
TACGCCGTTCTGTGCAGATGGGGCGGTGACGATGTATTTGAGGGGTGGGG
TGAGGGATGCGAGGAAGCTTATATTTGGGTTGCCGTTGTATGGAAGGGCT
TTTGAGGGGACGGATGGGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGG
GAGTTGGGAGAATGGGGTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGA
GTCAGGAGGTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCG
GCGAAGAGGAAGATGGTTAGTTATGATACGCCGGAGGTGGCCGGGATGAA
GACGGAGTATATTGCCGGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGT
TGAGTGGGGATCATCATGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACT
GCGGAGAGGTTGGGTAGGTTGGGTGGGTTGGACGGTACGGAGAATACGTT
GTATTATCCGCTGAGTCGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGAA
TGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCAA
GACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCAC
CAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCTG
ATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGTGATGTCCCAGGCCAA
GCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCCC
AGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCCCC
CGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAGA
CCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGCCG
CAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCTCT
ATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACACC
TACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCGG
TACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACAAC
ACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCCC
AACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCCG
CAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACATCG
ACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACCTT
TTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTGG
CGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAATA
TCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGAAT
CTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATAT
GGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAG
ATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAG
CTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATGG
GCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGG
TGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGAT
GGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGT
TAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCCG
GGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCAT
GTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAG
GTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATCCGCTGAGTC
GCTTTGAGAATTTGAGGAGGGGGTGTGTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008743-T1.utr5p1 | KJC3_008743-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH18 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001579 |
| DBxref | InterPro:IPR001223 |
| DBxref | InterPro:IPR036779 |
| DBxref | InterPro:IPR029070 |
| DBxref | InterPro:IPR011583 |
| DBxref | InterPro:IPR018392 |
| DBxref | PFAM:PF01476 |
| DBxref | PFAM:PF00704 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2895384..2897152 + |
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