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KJC3_009023-T1, KJC3_009023-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009023-T1
Unique NameKJC3_009023-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4002848..4004835+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009023-T1 ID=KJC3_009023-T1|Name=KJC3_009023-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1988bp|location=Sequence derived from alignment at ch6:4002848..4004835+ (Aspergillus niger KJC3)
GACATCCCCTCAACTTAACTTTTGGGTTCGCTTATCCTATCGCTGATTTG CATCCTCTTGCTACAGAGATATGGCGGCTCATGATATCCCTGAAAGATAT GGTGTTCATCCGGTTCGTGTCGCCAGAGGTCGGCTAATCCGCTTCGCCGA CAAACCTCCTCTCACAGAAGGACAAATAAGAGAAAACCAGGCCAACGAGC GCAATTCTCAACTGCAGGAGGAATACAACCATTTGTGTCGAAGACTTGTC AACGCCCTCGATGATAAAATATTCCTCACCGACAGTCTCGGGTTCATCGC CTCGCTGGTCACTGGCGGAGCGTTGCCCATTCCATGCCGGGGTCCGAATA ACCAATACGAGGAAGTGGATGGAGATCTCTCATTGCCGGAAAAGAATAGC ATCATGAGAATCAGACTTGCCGATGTGCTTTTGACATTATCTGCGGATAC TCAAACACTCAATACTCTTAATAAAGTCCTCCTAAGCCGAAGTTGCGAGC ACTCAGTTAGACCCGAGCCGAACACTCCAGGAATCTTTTATCGTTCTATT CGGTCGAGCAGTTACAGTCGATATGACAAACACCTTGGTTTCCGTTCTTC GAGACAACCATTCACGCTGCCTTCCAATCACCATGGCCCTCTACACGAGA GTTCATTGGTCGATAAGGACGTCTTGAAAAACCAGTGCGTGGGCGGTGGA CCTTCGGACCTCATCGCGATGTCTGACAGCCCTGCGAGGGTTTTGCGTTT TATCAAACACTGGGATTTCAGGGACCTAGAAGGAGAAATGATAGCCGTGA TTGATGTCTCAAAGCTTCTTGCCATGAGGGTCCTCTTCAGTCGTACAACG ACTTTATGTACCAAATTGGGTATAGATGCCTGGGCCCCCTCGCGGAGCAA CGGTCTCAGTTGGGTGAATCCAAATTATTGGGTGGCTTATCGATGGGTTC CGGCCGAGTGTATCGAATTTTGCGTATCTGTGGAGTTTCTGCGAAGTGCT TGCAAGGAGCATAGCATTGGTGAGTGATCCGGGATTTGAAAAGACTCAAT GCTTACATCAATCTTCAAGGAGATCTTGATTTCGATCGACAACTTTCACT TGACGATTTGCTTGGTCAAAGAATGGAAAGCCTCAGAATTTAAGGTGCCT GCACTTCTGATAACTTGGTCGTATCATAATTGCAGTAAGTCCGACGCCAA AACCCCCAACAAAAGAGCCTCCTCCGGTCTTTCTAAGTTGTACTATATGG CAAGAGATGAGGGATGCCTTGTCGTTATTTTACTATTTTTGCGGCTATCA TAATCTCAGACATCACGATAGAAGCCATGTACGGAATAACTTAAGCAGGT ACGCCCAAAGCACCGGCGCGGCGAGTCAGCGACTCCACCATTGACCCACA TCCCCAGAATTTTTTTGAACCCCTCCTTGGTCGAATTTCCGTCACCCTTA AGTGTCCCCAGGCGTCGTGCCACATCAAGCACTACCGGTTCGGAGGTCAC TGCGACCGTTGTTTCGGTTATGACCCACTTCACGAGGGGGCTGAACACTG GGATCCACCTCTGCAGCTGCGCAACACTATTGGTAGGTCGTCATAGAGGT CTAAAGCCGAGTTAGGCCTAGTGGCGAGCATCCCCAGTCTGGCTGGTTCA CATGTGACCGCATAGAAATATTCGATACGGTCACGTGCTTCTACGGTAAG CCTGCATATTACTTTGTTCGCGAGAAAGGGAAACAATACAATTAAATTTG GACGGGTACTGCAAATGGAGTATCCCCGCCGAAAGGGTGAGGCCGAGTAG ACAATCATTTGCACCTAAAACAACACCCCTTACCCTCAGTCAAAGCTGGT GTTGGGTGTCCCGATGGATTATACCCACTGTTTTGCATGCCTCATATTTT TAAAAATTTTGCCCGTATTCTTCGTTGAGCGATCCTTAAGGAAACGATCC TTTATTCAGCATCAACTAAAACACTAAGTAAATGTACA
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Coding sequence (CDS) from alignment at ch6:4002848..4004835+

>KJC3_009023-T1 ID=KJC3_009023-T1|Name=KJC3_009023-T1|organism=Aspergillus niger KJC3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch6:4002848..4004835+ (Aspergillus niger KJC3)
ATGGCGGCTCATGATATCCCTGAAAGATATGGTGTTCATCCGGTTCGTGT
CGCCAGAGGTCGGCTAATCCGCTTCGCCGACAAACCTCCTCTCACAGAAG
GACAAATAAGAGAAAACCAGGCCAACGAGCGCAATTCTCAACTGCAGGAG
GAATACAACCATTTGTGTCGAAGACTTGTCAACGCCCTCGATGATAAAAT
ATTCCTCACCGACAGTCTCGGGTTCATCGCCTCGCTGGTCACTGGCGGAG
CGTTGCCCATTCCATGCCGGGGTCCGAATAACCAATACGAGGAAGTGGAT
GGAGATCTCTCATTGCCGGAAAAGAATAGCATCATGAGAATCAGACTTGC
CGATGTGCTTTTGACATTATCTGCGGATACTCAAACACTCAATACTCTTA
ATAAAGTCCTCCTAAGCCGAAGTTGCGAGCACTCAGTTAGACCCGAGCCG
AACACTCCAGGAATCTTTTATCGTTCTATTCGGTCGAGCAGTTACAGTCG
ATATGACAAACACCTTGGTTTCCGTTCTTCGAGACAACCATTCACGCTGC
CTTCCAATCACCATGGCCCTCTACACGAGAGTTCATTGGTCGATAAGGAC
GTCTTGAAAAACCAGTGCGTGGGCGGTGGACCTTCGGACCTCATCGCGAT
GTCTGACAGCCCTGCGAGGGTTTTGCGTTTTATCAAACACTGGGATTTCA
GGGACCTAGAAGGAGAAATGATAGCCGTGATTGATGTCTCAAAGCTTCTT
GCCATGAGGGTCCTCTTCAGTCGTACAACGACTTTATGTACCAAATTGGG
TATAGATGCCTGGGCCCCCTCGCGGAGCAACGGTCTCAGTTGGGTGAATC
CAAATTATTGGGTGGCTTATCGATGGGTTCCGGCCGAGTGTATCGAATTT
TGCGTATCTGTGGAGTTTCTGCGAAGTGCTTGCAAGGAGCATAGCATTGG
AGATCTTGATTTCGATCGACAACTTTCACTTGACGATTTGCTTGGTCAAA
GAATGGAAAGCCTCAGAATTTAAATGGCGGCTCATGATATCCCTGAAAGA
TATGGTGTTCATCCGGTTCGTGTCGCCAGAGGTCGGCTAATCCGCTTCGC
CGACAAACCTCCTCTCACAGAAGGACAAATAAGAGAAAACCAGGCCAACG
AGCGCAATTCTCAACTGCAGGAGGAATACAACCATTTGTGTCGAAGACTT
GTCAACGCCCTCGATGATAAAATATTCCTCACCGACAGTCTCGGGTTCAT
CGCCTCGCTGGTCACTGGCGGAGCGTTGCCCATTCCATGCCGGGGTCCGA
ATAACCAATACGAGGAAGTGGATGGAGATCTCTCATTGCCGGAAAAGAAT
AGCATCATGAGAATCAGACTTGCCGATGTGCTTTTGACATTATCTGCGGA
TACTCAAACACTCAATACTCTTAATAAAGTCCTCCTAAGCCGAAGTTGCG
AGCACTCAGTTAGACCCGAGCCGAACACTCCAGGAATCTTTTATCGTTCT
ATTCGGTCGAGCAGTTACAGTCGATATGACAAACACCTTGGTTTCCGTTC
TTCGAGACAACCATTCACGCTGCCTTCCAATCACCATGGCCCTCTACACG
AGAGTTCATTGGTCGATAAGGACGTCTTGAAAAACCAGTGCGTGGGCGGT
GGACCTTCGGACCTCATCGCGATGTCTGACAGCCCTGCGAGGGTTTTGCG
TTTTATCAAACACTGGGATTTCAGGGACCTAGAAGGAGAAATGATAGCCG
TGATTGATGTCTCAAAGCTTCTTGCCATGAGGGTCCTCTTCAGTCGTACA
ACGACTTTATGTACCAAATTGGGTATAGATGCCTGGGCCCCCTCGCGGAG
CAACGGTCTCAGTTGGGTGAATCCAAATTATTGGGTGGCTTATCGATGGG
TTCCGGCCGAGTGTATCGAATTTTGCGTATCTGTGGAGTTTCTGCGAAGT
GCTTGCAAGGAGCATAGCATTGGAGATCTTGATTTCGATCGACAACTTTC
ACTTGACGATTTGCTTGGTCAAAGAATGGAAAGCCTCAGAATTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009023KJC3_009023Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009023-T1.utr5p1KJC3_009023-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009023-T1.exon1KJC3_009023-T1.exon1Aspergillus niger KJC3exon
KJC3_009023-T1.exon2KJC3_009023-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009023-T1.cdsKJC3_009023-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009023-T1.utr3p1KJC3_009023-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009023-T1KJC3_009023-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4002848..4004835 +