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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4002848..4004835+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009023-T1 ID=KJC3_009023-T1|Name=KJC3_009023-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1988bp|location=Sequence derived from alignment at ch6:4002848..4004835+ (Aspergillus niger KJC3)
GACATCCCCTCAACTTAACTTTTGGGTTCGCTTATCCTATCGCTGATTTG
CATCCTCTTGCTACAGAGATATGGCGGCTCATGATATCCCTGAAAGATAT
GGTGTTCATCCGGTTCGTGTCGCCAGAGGTCGGCTAATCCGCTTCGCCGA
CAAACCTCCTCTCACAGAAGGACAAATAAGAGAAAACCAGGCCAACGAGC
GCAATTCTCAACTGCAGGAGGAATACAACCATTTGTGTCGAAGACTTGTC
AACGCCCTCGATGATAAAATATTCCTCACCGACAGTCTCGGGTTCATCGC
CTCGCTGGTCACTGGCGGAGCGTTGCCCATTCCATGCCGGGGTCCGAATA
ACCAATACGAGGAAGTGGATGGAGATCTCTCATTGCCGGAAAAGAATAGC
ATCATGAGAATCAGACTTGCCGATGTGCTTTTGACATTATCTGCGGATAC
TCAAACACTCAATACTCTTAATAAAGTCCTCCTAAGCCGAAGTTGCGAGC
ACTCAGTTAGACCCGAGCCGAACACTCCAGGAATCTTTTATCGTTCTATT
CGGTCGAGCAGTTACAGTCGATATGACAAACACCTTGGTTTCCGTTCTTC
GAGACAACCATTCACGCTGCCTTCCAATCACCATGGCCCTCTACACGAGA
GTTCATTGGTCGATAAGGACGTCTTGAAAAACCAGTGCGTGGGCGGTGGA
CCTTCGGACCTCATCGCGATGTCTGACAGCCCTGCGAGGGTTTTGCGTTT
TATCAAACACTGGGATTTCAGGGACCTAGAAGGAGAAATGATAGCCGTGA
TTGATGTCTCAAAGCTTCTTGCCATGAGGGTCCTCTTCAGTCGTACAACG
ACTTTATGTACCAAATTGGGTATAGATGCCTGGGCCCCCTCGCGGAGCAA
CGGTCTCAGTTGGGTGAATCCAAATTATTGGGTGGCTTATCGATGGGTTC
CGGCCGAGTGTATCGAATTTTGCGTATCTGTGGAGTTTCTGCGAAGTGCT
TGCAAGGAGCATAGCATTGGTGAGTGATCCGGGATTTGAAAAGACTCAAT
GCTTACATCAATCTTCAAGGAGATCTTGATTTCGATCGACAACTTTCACT
TGACGATTTGCTTGGTCAAAGAATGGAAAGCCTCAGAATTTAAGGTGCCT
GCACTTCTGATAACTTGGTCGTATCATAATTGCAGTAAGTCCGACGCCAA
AACCCCCAACAAAAGAGCCTCCTCCGGTCTTTCTAAGTTGTACTATATGG
CAAGAGATGAGGGATGCCTTGTCGTTATTTTACTATTTTTGCGGCTATCA
TAATCTCAGACATCACGATAGAAGCCATGTACGGAATAACTTAAGCAGGT
ACGCCCAAAGCACCGGCGCGGCGAGTCAGCGACTCCACCATTGACCCACA
TCCCCAGAATTTTTTTGAACCCCTCCTTGGTCGAATTTCCGTCACCCTTA
AGTGTCCCCAGGCGTCGTGCCACATCAAGCACTACCGGTTCGGAGGTCAC
TGCGACCGTTGTTTCGGTTATGACCCACTTCACGAGGGGGCTGAACACTG
GGATCCACCTCTGCAGCTGCGCAACACTATTGGTAGGTCGTCATAGAGGT
CTAAAGCCGAGTTAGGCCTAGTGGCGAGCATCCCCAGTCTGGCTGGTTCA
CATGTGACCGCATAGAAATATTCGATACGGTCACGTGCTTCTACGGTAAG
CCTGCATATTACTTTGTTCGCGAGAAAGGGAAACAATACAATTAAATTTG
GACGGGTACTGCAAATGGAGTATCCCCGCCGAAAGGGTGAGGCCGAGTAG
ACAATCATTTGCACCTAAAACAACACCCCTTACCCTCAGTCAAAGCTGGT
GTTGGGTGTCCCGATGGATTATACCCACTGTTTTGCATGCCTCATATTTT
TAAAAATTTTGCCCGTATTCTTCGTTGAGCGATCCTTAAGGAAACGATCC
TTTATTCAGCATCAACTAAAACACTAAGTAAATGTACA back to topCoding sequence (CDS) from alignment at ch6:4002848..4004835+ >KJC3_009023-T1 ID=KJC3_009023-T1|Name=KJC3_009023-T1|organism=Aspergillus niger KJC3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch6:4002848..4004835+ (Aspergillus niger KJC3)
ATGGCGGCTCATGATATCCCTGAAAGATATGGTGTTCATCCGGTTCGTGT
CGCCAGAGGTCGGCTAATCCGCTTCGCCGACAAACCTCCTCTCACAGAAG
GACAAATAAGAGAAAACCAGGCCAACGAGCGCAATTCTCAACTGCAGGAG
GAATACAACCATTTGTGTCGAAGACTTGTCAACGCCCTCGATGATAAAAT
ATTCCTCACCGACAGTCTCGGGTTCATCGCCTCGCTGGTCACTGGCGGAG
CGTTGCCCATTCCATGCCGGGGTCCGAATAACCAATACGAGGAAGTGGAT
GGAGATCTCTCATTGCCGGAAAAGAATAGCATCATGAGAATCAGACTTGC
CGATGTGCTTTTGACATTATCTGCGGATACTCAAACACTCAATACTCTTA
ATAAAGTCCTCCTAAGCCGAAGTTGCGAGCACTCAGTTAGACCCGAGCCG
AACACTCCAGGAATCTTTTATCGTTCTATTCGGTCGAGCAGTTACAGTCG
ATATGACAAACACCTTGGTTTCCGTTCTTCGAGACAACCATTCACGCTGC
CTTCCAATCACCATGGCCCTCTACACGAGAGTTCATTGGTCGATAAGGAC
GTCTTGAAAAACCAGTGCGTGGGCGGTGGACCTTCGGACCTCATCGCGAT
GTCTGACAGCCCTGCGAGGGTTTTGCGTTTTATCAAACACTGGGATTTCA
GGGACCTAGAAGGAGAAATGATAGCCGTGATTGATGTCTCAAAGCTTCTT
GCCATGAGGGTCCTCTTCAGTCGTACAACGACTTTATGTACCAAATTGGG
TATAGATGCCTGGGCCCCCTCGCGGAGCAACGGTCTCAGTTGGGTGAATC
CAAATTATTGGGTGGCTTATCGATGGGTTCCGGCCGAGTGTATCGAATTT
TGCGTATCTGTGGAGTTTCTGCGAAGTGCTTGCAAGGAGCATAGCATTGG
AGATCTTGATTTCGATCGACAACTTTCACTTGACGATTTGCTTGGTCAAA
GAATGGAAAGCCTCAGAATTTAAATGGCGGCTCATGATATCCCTGAAAGA
TATGGTGTTCATCCGGTTCGTGTCGCCAGAGGTCGGCTAATCCGCTTCGC
CGACAAACCTCCTCTCACAGAAGGACAAATAAGAGAAAACCAGGCCAACG
AGCGCAATTCTCAACTGCAGGAGGAATACAACCATTTGTGTCGAAGACTT
GTCAACGCCCTCGATGATAAAATATTCCTCACCGACAGTCTCGGGTTCAT
CGCCTCGCTGGTCACTGGCGGAGCGTTGCCCATTCCATGCCGGGGTCCGA
ATAACCAATACGAGGAAGTGGATGGAGATCTCTCATTGCCGGAAAAGAAT
AGCATCATGAGAATCAGACTTGCCGATGTGCTTTTGACATTATCTGCGGA
TACTCAAACACTCAATACTCTTAATAAAGTCCTCCTAAGCCGAAGTTGCG
AGCACTCAGTTAGACCCGAGCCGAACACTCCAGGAATCTTTTATCGTTCT
ATTCGGTCGAGCAGTTACAGTCGATATGACAAACACCTTGGTTTCCGTTC
TTCGAGACAACCATTCACGCTGCCTTCCAATCACCATGGCCCTCTACACG
AGAGTTCATTGGTCGATAAGGACGTCTTGAAAAACCAGTGCGTGGGCGGT
GGACCTTCGGACCTCATCGCGATGTCTGACAGCCCTGCGAGGGTTTTGCG
TTTTATCAAACACTGGGATTTCAGGGACCTAGAAGGAGAAATGATAGCCG
TGATTGATGTCTCAAAGCTTCTTGCCATGAGGGTCCTCTTCAGTCGTACA
ACGACTTTATGTACCAAATTGGGTATAGATGCCTGGGCCCCCTCGCGGAG
CAACGGTCTCAGTTGGGTGAATCCAAATTATTGGGTGGCTTATCGATGGG
TTCCGGCCGAGTGTATCGAATTTTGCGTATCTGTGGAGTTTCTGCGAAGT
GCTTGCAAGGAGCATAGCATTGGAGATCTTGATTTCGATCGACAACTTTC
ACTTGACGATTTGCTTGGTCAAAGAATGGAAAGCCTCAGAATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009023-T1.utr5p1 | KJC3_009023-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009023-T1.utr3p1 | KJC3_009023-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4002848..4004835 + |
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