|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4295292..4296201- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012688-T1 ID=KJC3_012688-T1|Name=KJC3_012688-T1|organism=Aspergillus niger KJC3|type=mRNA|length=910bp|location=Sequence derived from alignment at ch8:4295292..4296201- (Aspergillus niger KJC3) CCACCCTCTTCGCGCGTTGTCAAGGCGATTCCCCGAAGAGCGCTAGGAAC
TCGCGACAATGTAAGTGATGCACCTAATATCGGCCATTGATATCATATAG
GATAATGTAGCTAACCCCGAGCCAGGCTTATCCCCAAGGAAGACCGCAAG
AAGATCCACGAGTACCTCTTCCGCGGTATGTGAACACCTATGATCCACCG
GCCTTGTGTCTCCGAATTGTTGCGCGACGGTCGATCGATGGATGATGGAT
GAATCAGTCTTGCTGACGGTTGACTATAGAGGGTGTGCTCGTGGCCAAGA
AGGACTTCAACCTTCCCAAGCATGGCGACATTGACACCAAGAACCTCTAC
GTGATCAAGGCCTGCCAGTCCCTGACCTCCCGCGGCTACGTCAAGACCCA
GTTCTCCTGGCAGTACTACTACTACACCCTCACCCCCGAGGTATGCTCCA
CTGATGAAGATGAATGCGTAAGACGGATTGTCTGACTGGTTTTGATATAG
GGTCTTGACTACCTCCGTGAGTGGCTCCACCTCCCCGCTGAGGTTGTCCC
CGCCACCCACATCAAGCAGCAGCGTTCCCACGCTCCCCCTCGTGGCATGA
TGGGCGGTGAGGAGCGTGAGCGTCGTCCCCGTGCTCCTCGTGAGGGTGGC
TACCGCCGCCGCGAGCAGGACAAGGAGGGCGCCGCCCCCGGCGAGTTCGC
TCCCAGCTTCCGTGGTGGATTCGGCCGTGGCCGTGGTGCTCCCTCCTCCT
AAGGGGTGTCGCCTGCCGGTCTTCCAAGGGCTTAATGGGATTGTTGCCGG
TGTGGCTTGAATGACTTTGAAAGAAGTCGGGAAGCTATGCTGTGCACGTC
CTAAAAAGAAGTTATGCCAAGCTACTGTTTCACAGTTATGATATAGTTAG
GATTAATGGC back to topCoding sequence (CDS) from alignment at ch8:4295292..4296201- >KJC3_012688-T1 ID=KJC3_012688-T1|Name=KJC3_012688-T1|organism=Aspergillus niger KJC3|type=CDS|length=1860bp|location=Sequence derived from alignment at ch8:4295292..4296201- (Aspergillus niger KJC3) GGTCTTGACTACCTCCGTGAGTGGCTCCACCTCCCCGCTGAGGTTGTCCC CGCCACCCACATCAAGCAGCAGCGTTCCCACGCTCCCCCTCGTGGCATGA TGGGCGGTGAGGAGCGTGAGCGTCGTCCCCGTGCTCCTCGTGAGGGTGGC TACCGCCGCCGCGAGCAGGACAAGGAGGGCGCCGCCCCCGGCGAGTTCGC TCCCAGCTTCCGTGGTGGATTCGGCCGTGGCCGTGGTGCTCCCTCCTCCT AAAGGGTGTGCTCGTGGCCAAGAAGGACTTCAACCTTCCCAAGCATGGCG ACATTGACACCAAGAACCTCTACGTGATCAAGGCCTGCCAGTCCCTGACC TCCCGCGGCTACGTCAAGACCCAGTTCTCCTGGCAGTACTACTACTACAC CCTCACCCCCGAGGCTTATCCCCAAGGAAGACCGCAAGAAGATCCACGAG TACCTCTTCCGCGATGGTCTTGACTACCTCCGTGAGTGGCTCCACCTCCC CGCTGAGGTTGTCCCCGCCACCCACATCAAGCAGCAGCGTTCCCACGCTC CCCCTCGTGGCATGATGGGCGGTGAGGAGCGTGAGCGTCGTCCCCGTGCT CCTCGTGAGGGTGGCTACCGCCGCCGCGAGCAGGACAAGGAGGGCGCCGC CCCCGGCGAGTTCGCTCCCAGCTTCCGTGGTGGATTCGGCCGTGGCCGTG GTGCTCCCTCCTCCTAAAGGGTGTGCTCGTGGCCAAGAAGGACTTCAACC TTCCCAAGCATGGCGACATTGACACCAAGAACCTCTACGTGATCAAGGCC TGCCAGTCCCTGACCTCCCGCGGCTACGTCAAGACCCAGTTCTCCTGGCA GTACTACTACTACACCCTCACCCCCGAGGCTTATCCCCAAGGAAGACCGC AAGAAGATCCACGAGTACCTCTTCCGCGATGGTCTTGACTACCTCCGTGA GTGGCTCCACCTCCCCGCTGAGGTTGTCCCCGCCACCCACATCAAGCAGC AGCGTTCCCACGCTCCCCCTCGTGGCATGATGGGCGGTGAGGAGCGTGAG CGTCGTCCCCGTGCTCCTCGTGAGGGTGGCTACCGCCGCCGCGAGCAGGA CAAGGAGGGCGCCGCCCCCGGCGAGTTCGCTCCCAGCTTCCGTGGTGGAT TCGGCCGTGGCCGTGGTGCTCCCTCCTCCTAAAGGGTGTGCTCGTGGCCA AGAAGGACTTCAACCTTCCCAAGCATGGCGACATTGACACCAAGAACCTC TACGTGATCAAGGCCTGCCAGTCCCTGACCTCCCGCGGCTACGTCAAGAC CCAGTTCTCCTGGCAGTACTACTACTACACCCTCACCCCCGAGGCTTATC CCCAAGGAAGACCGCAAGAAGATCCACGAGTACCTCTTCCGCGATGGTCT TGACTACCTCCGTGAGTGGCTCCACCTCCCCGCTGAGGTTGTCCCCGCCA CCCACATCAAGCAGCAGCGTTCCCACGCTCCCCCTCGTGGCATGATGGGC GGTGAGGAGCGTGAGCGTCGTCCCCGTGCTCCTCGTGAGGGTGGCTACCG CCGCCGCGAGCAGGACAAGGAGGGCGCCGCCCCCGGCGAGTTCGCTCCCA GCTTCCGTGGTGGATTCGGCCGTGGCCGTGGTGCTCCCTCCTCCTAAAGG GTGTGCTCGTGGCCAAGAAGGACTTCAACCTTCCCAAGCATGGCGACATT GACACCAAGAACCTCTACGTGATCAAGGCCTGCCAGTCCCTGACCTCCCG CGGCTACGTCAAGACCCAGTTCTCCTGGCAGTACTACTACTACACCCTCA CCCCCGAGGCTTATCCCCAAGGAAGACCGCAAGAAGATCCACGAGTACCT CTTCCGCGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012688-T1.utr3p1 | KJC3_012688-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012688-T1.utr5p1 | KJC3_012688-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036388 |
DBxref | InterPro:IPR005326 |
DBxref | PFAM:PF03501 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:4295292..4296201 - |
|